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Integrative Systems Biology, Metabolomics and Cancer
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Articles
2006-...
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Santos RC, Salvador JA, Cortés R, Pachón G, Marín S, Cascante M. New betulinic acid derivatives induce potent and selective antiproliferative activity through cell cycle arrest at the S phase and caspase dependent apoptosis in human cancer cells. Biochimie. 2011 Mar 3. [Epub ahead of print] |
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Maier D, Kalus W, Wolff M, Kalko SG, Roca J, Marin de Mas I, Turan N, Cascante M, Falciani F, Hernandez M, Villa-Freixa J, Losko S. Knowledge management for Systems Biology a general and visually driven framework applied to translational medicine. BMC Syst Biol. 2011 Mar 5;5(1):38. [Epub ahead of print]. |
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Ramírez-Bajo MJ, Repiso A, la Ossa PP, Bañón-Maneus E, de Atauri P, Climent F, Corrons JL, Cascante M, Carreras J. Enzymatic and metabolic characterization of the phosphoglycerate kinase deficiency associated with chronic hemolytic anemia caused by the PGK-Barcelona mutation. Blood Cells Mol Dis. 2011 Mar 15;46(3):206-11. |
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Pastor I, Vilaseca E, Madurga S, Garcés JL, Cascante M, Mas F. Effect of crowding by dextrans on the hydrolysis of N-Succinyl-L-phenyl-Ala-p-nitroanilide catalyzed by α-chymotrypsin. J Phys Chem B. 2011 Feb 10;115(5):1115-21.
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de Atauri P, Benito A, Vizán P, Zanuy M, Mangues R, Marín S, Cascante M. Carbon metabolism and the sign of control coefficients in metabolic adaptations underlying K-ras transformation. Biochim Biophys Acta. 2010 Dec 23. [Epub ahead of print] |
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Selivanov VA, Vizán P, Mollinedo F, Fan TW, Lee PW, Cascante M. Edelfosine-induced metabolic changes in cancer cells that precede the overproduction of reactive oxygen species and apoptosis. BMC Syst Biol 2010 Oct 6;4:135. |
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Touriño S, Fuguet E, Jáuregui O, Saura-Calixto F, Cascante M, Torres JL. High-resolution liquid chromatography/electrospray ionization time-of-flight mass spectrometry combined with liquid chromatography/electrospray ionization tandem mass spectrometry to identify polyphenols from grape antioxidant dietary fiber. Rapid Commun Mass Spectrom. 2008 Nov;22(22):3489-500. |
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Selivanov VA, Zeak JA, Roca J, Cascante M, Trucco M, Votyakova TV. The role of external and matrix ph in mitochondrial reactive oxygen species generation. J Biol Chem. 2008 Oct;283(43):29292-300. |
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Pachón OG, Azqueta A, Lavaggi ML, López de Cerain A, Creppy E, Collins A, Cerecetto H, González M, Centelles JJ, Cascante M. Antitumoral effect of phenazine N5,N10-dioxide derivatives on Caco-2 cells Chem Res Toxicol. 2008 Aug;21(8):1578-85. |
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Frederiks WM, Vizan P, Bosch KS, Vreeling-Sindelárová H, Boren J, Cascante M. Elevated activity of the oxidative and non-oxidative pentose phosphate pathway in (pre)neoplastic lesions in rat liver. Int J Exp Pathol. 2008 Aug;89(4):232-40. |
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Touriño S, Lizárraga D, Carreras A, Lorenzo S, Ugartondo V, Mitjans M, Vinardell MP, Juliá L, Cascante M, Torres JL. Highly Galloylated Tannin Fractions from Witch Hazel (Hamamelis virginiana) Bark: Electron Transfer Capacity, In Vitro Antioxidant Activity, and Effects on Skin-Related Cells. Chem Res Toxicol. 2008 Mar;21(3):696-704. |
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Vizán, P.; Mazurek, S. and Cascante, M. Robust metabolic adaptation underlying tumor progression. Metabolomics 2008; 4:1-12. DOI: 10.1007/s11306-007-0101-3. |
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Ortega F, Cascante M, Acerenza L. Kinetic properties required for sustained or paradoxical control of metabolic fluxes under large changes in enzyme activities. J Theor Biol. 2007 Jun;252(3)569-73. |
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Selivanov VA, de Atauri P, Centelles JJ, Cadefau J, Parra J, Cussó R, Carreras J, Cascante M. The changes in the energy metabolism of human muscle induced by training. J Theor Biol. 2007 Jun;252(3):402-10. |
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Lizarraga D, Lozano C,
Briede JJ, van Delft JH, Tourino S, Centelles JJ, Torres JL,
Cascante M.
The importance of
polymerization and galloylation for the antiproliferative
properties of procyanidin-rich natural extracts. FEBS
J. 2007 Sep;274(18):4802-4811.
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Vera-Gonzalez J, Curto
R, Cascante M, Torres NV. Detection of
potential enzyme targets by metabolic modelling and optimization.
Application to a simple enzymopathy.Bioinformatics.
2007 Sep; 23(17):2281-2289. |
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Vizan P, Alcarraz-Vizan G, Diaz-Moralli S, Rodriguez-Prados JC, Zanuy M, Centelles JJ, Jauregui O, Cascante M. Quantification of Intracellular Phosphorylated Carbohydrates in HT29 Human Colon Adenocarcinoma Cell Line Using Liquid Chromatography-Electrospray Ionization Tandem Mass Spectrometry Anal Chem. 2007 Jul 1;79(13):5000-5005. |
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Pachon G, Rasoanaivo
H, Azqueta A, Rakotozafy JC, Raharisololalao A, De Cerain AL, De
Lapuente J, Borras M, Moukha S, Centelles JJ, Creppy EE,
Cascante M.
Anticancer effect of a new benzophenanthridine isolated from
Zanthoxylum madagascariense (Rutaceline).In
Vivo. 2007 Mar-Apr;21(2):417-22. |
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Azqueta A, Arbillaga
L, Pachon G, Cascante M, Creppy EE, Cerain AL. A quinoxaline
1,4-di-N-oxide derivative induces DNA oxidative damage not
attenuated by vitamin C and E treatment.Chem
Biol Interact. 2007 Jun 30;168(2):95-105. |
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Selivanov V, Krause S,
Roca J, Cascante M. Modeling of Spatial
Metabolite Distributions in the Cardiac Sarcomere.
Biophys J. 2007 May;92(10):3492-500. |
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Isvoran A, Vilaseca E,
Ortega F, Cascante M, Mas F.
About implementing
a Monte Carlo simulation algorithm for enzymatic reactions in
crowded media.
J Serb Chem Soc.
2006;71(1):75-86. |
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Selivanov VA, Sukhomlin T, Centelles JJ, Lee PW, Cascante M. Integration of enzyme kinetic models and isotopomer distribution analysis for studies of in situ cell operation. BMC Neurosci. 2006 Oct 30;7 Suppl 1:S7 [Epub ahead of print]. |
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Medina, I.; Lois, S.; Lizarraga, D.; Pazos, M.; Tourino, S.; Cascante, M.; Torres, J. L. Functional Fatty Fish Supplemented with Grape Procyanidins. Antioxidant and Proapoptotic Properties on Colon Cell Lines.J. Agric. Food Chem.; (Article); 2006; 54(10); 3598-3603. |
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Reyes FJ, Centelles JJ,
Lupianez JA, Cascante M. (2alpha,3beta)-2,3-Dihydroxyolean-12-en-28-oic
acid, a new natural triterpene from Olea europea, induces
caspase dependent apoptosis selectively in colon adenocarcinoma
cells.
FEBS Lett. 2006 Oct;580(27):6302-10. |
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Ramos-Montoya A, Lee
WN, Bassilian S, Lim S, Trebukhina RV, Kazhyna MV, Ciudad CJ,
Noe V, Centelles JJ, Cascante M. Pentose phosphate
cycle oxidative and nonoxidative balance: A new vulnerable
target for overcoming drug resistance in cancer.
Int J Cancer. 2006 Dec;119(12):2733-41. |
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Selivanov VA, Marin S,
Lee PW, Cascante M. Software for
dynamic analysis of tracer-based metabolomic data: estimation of
metabolic fluxes and their statistical analysis.
Bioinformatics. 2006 Nov;22(22):2806-12. |
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Ortega F, Garces JL,
Mas F, Kholodenko BN, Cascante M. Bistability from
double phosphorylation in signal transduction. Kinetic and
structural requirements.
FEBS J. 2006 Sep;273(17):3915-26. Review.
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Sillero A, Selivanov VA, Cascante M. Pentose phosphate and Calvin cycles similarities and three-dimensional views. Biochem Mol Biol Edu 2006 Jul;34(4):275-277. |
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Rodriguez-Caso C, Montanez R, Cascante M, Sanchez-Jimenez F, Medina MA. Mathematical modeling of polyamine metabolism in mammals. J Biol Chem. 2006 May;281(31):21799-812. |
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Lozano C, Julia L, Jimenez A, Tourino S, Centelles JJ, Cascante
M, Torres JL. Electron-transfer capacity of catechin
derivatives and influence on the cell cycle and apoptosis in
HT29 cells.
FEBS J. 2006 Jun;273(11):2475-86. |
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Cespedes MV, Sancho FJ, Guerrero S,
Parreno M, Casanova I, Pavon MA, Marcuello E, Trias M, Cascante
M, Capella G, Mangues R. K-Ras Asp12 mutant neither interacts
with Raf, nor signals through Erk, and is less tumorigenic than
K-Ras Val12.
Carcinogenesis. 2006 May;27(11):2190-200. |
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de Atauri
P, Ramirez MJ, Kuchel PW, Carreras J, Cascante M. Metabolic
homeostasis in the human erythrocyte: in silico analysis. |
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Boren J, Ramos-Montoya A, Bosch KS, Vreeling H, Jonker A, Centelles JJ, Cascante M, Frederiks WM. In situ localization of transketolase activity in epithelial cells of different rat tissues and subcellularly in liver parenchymal cells. J Histochem Cytochem. 2006 Feb;54(2):191-9. |
Research Groups
of the Department
Department of Biochemistry
and Molecular Biology
Last update: March, 11th 2011